PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN30346.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 242aa    MW: 27120.4 Da    PI: 8.5232
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN30346.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-1367113354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+E+rRR+riNs +++Lr+llP +      K +Ka+ L k+v+ +k+L
  KHN30346.1  67 KNHKEAEKRRRERINSHLDQLRTLLPCN-----SKTDKASLLAKVVQRVKEL 113
                 58*************************8.....7************999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-1461121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82864113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-1167113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.87E-1267116No hitNo description
Gene3DG3DSA:4.10.280.103.8E-1468122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-1270119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.8E-4157218No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MDNSHLLQFL PNTTTSTNNT PFFHHAPPHT HSTFSTNSSN NTSSYPFHLS QITETPSHHD  60
RALAAMKNHK EAEKRRRERI NSHLDQLRTL LPCNSKTDKA SLLAKVVQRV KELKQQTSEI  120
TELETVPSET DEITVLATTG GDYASGGDDG RLIFKASLCC EDRSDLIPDL IEILNSLHLK  180
TLKAEMATLG GRTRNVLIVA ADKEHSIESI HFLQNSLKSL LDRSSSGDRS KRRRGLDRRL  240
MS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003520487.11e-178PREDICTED: transcription factor bHLH106-like
SwissprotO806749e-77BH106_ARATH; Transcription factor bHLH106
TrEMBLA0A0B2R7D91e-178A0A0B2R7D9_GLYSO; Transcription factor bHLH106
TrEMBLA0A0R0KI951e-178A0A0R0KI95_SOYBN; Uncharacterized protein
TrEMBLK7KEN21e-177K7KEN2_SOYBN; Uncharacterized protein
STRINGGLYMA03G28150.21e-177(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF66723249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.14e-72bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]